Thymine
- Formula: C5H6N2O2
- Molecular weight: 126.1133
- IUPAC Standard InChIKey: RWQNBRDOKXIBIV-UHFFFAOYSA-N
- CAS Registry Number: 65-71-4
- Chemical structure:
This structure is also available as a 2d Mol file - Other names: 2,4(1H,3H)-Pyrimidinedione, 5-methyl-; Thymin; 2,4-Dihydroxy-5-methylpyrimidine; 5-Methyluracil; 5-Methyl-2,4-dioxypyrimidine; 5-Methyl-2,4(1H,3H)-pyrimidinedione
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Phase change data
Go To: Top, Gas phase ion energetics data, References, Notes
Data compilation copyright by the U.S. Secretary of Commerce on behalf of the U.S.A. All rights reserved.
Data compiled as indicated in comments:
TRC - Thermodynamics Research Center, NIST Boulder Laboratories, Chris Muzny director
ALS - Hussein Y. Afeefy, Joel F. Liebman, and Stephen E. Stein
AC - William E. Acree, Jr., James S. Chickos
DH - Eugene S. Domalski and Elizabeth D. Hearing
Quantity | Value | Units | Method | Reference | Comment |
---|---|---|---|---|---|
Tfus | 321.3 | K | N/A | Eykman, 1889 | Uncertainty assigned by TRC = 1. K; TRC |
Quantity | Value | Units | Method | Reference | Comment |
ΔvapH° | 134.1 ± 4.2 | kJ/mol | V | Nabavian, Sabbah, et al., 1977 | ALS |
Quantity | Value | Units | Method | Reference | Comment |
ΔsubH° | 131.3 ± 4.0 | kJ/mol | N/A | Burkinshaw and Mortimer, 1984 | AC |
ΔsubH° | 138. ± 10. | kJ/mol | TE | Ferro, Bencivenni, et al., 1980 | AC |
ΔsubH° | 134.1 ± 4.2 | kJ/mol | C | Nabavian, Sabbah, et al., 1977, 2 | AC |
Enthalpy of sublimation
ΔsubH (kJ/mol) | Temperature (K) | Method | Reference | Comment |
---|---|---|---|---|
125.7 ± 3.6 | 411. | ME | Burkinshaw and Mortimer, 1984 | Based on data from 383. to 438. K.; AC |
124.4 ± 1.3 | 403. | QR | Teplitsky, Yanson, et al., 1980 | Based on data from 378. to 428. K.; AC |
Enthalpy of fusion
ΔfusH (kJ/mol) | Temperature (K) | Reference | Comment |
---|---|---|---|
17.51 | 321.3 | Domalski and Hearing, 1996 | AC |
17.510 | 321.3 | Eykman, 1889, 2 | DH |
Gas phase ion energetics data
Go To: Top, Phase change data, References, Notes
Data compilation copyright by the U.S. Secretary of Commerce on behalf of the U.S.A. All rights reserved.
Data evaluated as indicated in comments:
HL - Edward P. Hunter and Sharon G. Lias
Data compiled as indicated in comments:
LLK - Sharon G. Lias, Rhoda D. Levin, and Sherif A. Kafafi
RDSH - Henry M. Rosenstock, Keith Draxl, Bruce W. Steiner, and John T. Herron
B - John E. Bartmess
Quantity | Value | Units | Method | Reference | Comment |
---|---|---|---|---|---|
Proton affinity (review) | 880.9 | kJ/mol | N/A | Hunter and Lias, 1998 | HL |
Quantity | Value | Units | Method | Reference | Comment |
Gas basicity | 850.0 | kJ/mol | N/A | Hunter and Lias, 1998 | HL |
Electron affinity determinations
EA (eV) | Method | Reference | Comment |
---|---|---|---|
0.0690 ± 0.0070 | LPES | Hendricks, Lyapustina, et al., 1996 | Aflatooni, Gallup, et al., 1998: vertical attachment EA = -0.29 eV; B |
2.40 ± 0.10 | LPES | Li, Bowen, et al., 2007 | valence state of rare tautomer(N3-H to C5) inferred from calculations; B |
0.06999 | N/A | Desfrancois, Abdoul-Carime, et al., 1999 | B |
0.0620 ± 0.0080 | LPES | Schiedt, Weinkauf, et al., 1998 | B |
0.068 ± 0.020 | N/A | Desfrancois, Abdoul-Carime, et al., 1996 | B |
Ionization energy determinations
IE (eV) | Method | Reference | Comment |
---|---|---|---|
9.0 ± 0.1 | EI | Verkin, Sukodub, et al., 1976 | LLK |
9.4 ± 0.1 | EI | Lifschitz, Bergmann, et al., 1967 | RDSH |
9.20 | PE | Dougherty, Wittel, et al., 1976 | Vertical value; LLK |
9.02 | PE | Lauer, Schafer, et al., 1975 | Vertical value; LLK |
9.14 ± 0.03 | PE | Hush and Cheung, 1975 | Vertical value; LLK |
References
Go To: Top, Phase change data, Gas phase ion energetics data, Notes
Data compilation copyright by the U.S. Secretary of Commerce on behalf of the U.S.A. All rights reserved.
Eykman, 1889
Eykman, J.F.,
Z. Phys. Chem., Stoechiom. Verwandtschaftsl., 1889, 4, 497. [all data]
Nabavian, Sabbah, et al., 1977
Nabavian, P.M.; Sabbah, R.; Chastel, R.; Laffitte, M.,
Thermodynamique de composes azotes. II. Etude thermochimique des acides aminobenzoiques, de la pyrimidine, de l'uracile et de la thymine.,
J. Chim. Phys., 1977, 74, 115-126. [all data]
Burkinshaw and Mortimer, 1984
Burkinshaw, Philip M.; Mortimer, Colin T.,
Enthalpies of sublimation of transition metal complexes,
J. Chem. Soc., Dalton Trans., 1984, 1, 75, https://doi.org/10.1039/dt9840000075
. [all data]
Ferro, Bencivenni, et al., 1980
Ferro, D.; Bencivenni, L.; Teghil, R.; Mastromarino, R.,
Vapour pressures and sublimation enthalpies of thymine and cytosine,
Thermochimica Acta, 1980, 42, 1, 75-83, https://doi.org/10.1016/0040-6031(80)87117-6
. [all data]
Nabavian, Sabbah, et al., 1977, 2
Nabavian, M.; Sabbah, R.; Chastel, R.; Laffitte, M.,
J. Chim. Phys.Phys.-Chim. Biol., 1977, 74, 115. [all data]
Teplitsky, Yanson, et al., 1980
Teplitsky, A.B.; Yanson, I.K.; Glukhova, O.T.; Zielenkiwicz, A.; Zielenkiewicz, W.; Wierzchowski, K.L.,
Thermochemistry of aqueous solutions of alkylated nucleic acid bases,
Biophysical Chemistry, 1980, 11, 1, 17-21, https://doi.org/10.1016/0301-4622(80)85003-4
. [all data]
Domalski and Hearing, 1996
Domalski, Eugene S.; Hearing, Elizabeth D.,
Heat Capacities and Entropies of Organic Compounds in the Condensed Phase. Volume III,
J. Phys. Chem. Ref. Data, 1996, 25, 1, 1, https://doi.org/10.1063/1.555985
. [all data]
Eykman, 1889, 2
Eykman, J.F.,
Zur kryoskopischen Molekulargewichtsbestimmung,
Z. Physik. Chem., 1889, 4, 497-519. [all data]
Hunter and Lias, 1998
Hunter, E.P.; Lias, S.G.,
Evaluated Gas Phase Basicities and Proton Affinities of Molecules: An Update,
J. Phys. Chem. Ref. Data, 1998, 27, 3, 413-656, https://doi.org/10.1063/1.556018
. [all data]
Hendricks, Lyapustina, et al., 1996
Hendricks, J.H.; Lyapustina, S.A.; de Clercq, H.L.; Snodgrass, J.T.; Bowen, K.H.,
Dipole bound, nucleic Acid Base Anions Studied via Negative Ion Photoelectron Spectroscopy,
J. Chem. Phys., 1996, 104, 19, 7788, https://doi.org/10.1063/1.471482
. [all data]
Aflatooni, Gallup, et al., 1998
Aflatooni, K.; Gallup, G.A.; Burrows, P.D.,
Electron Attachment Energies of the DNA Bases,
J. Phys. Chem., 1998, 102, 31, 6205, https://doi.org/10.1021/jp980865n
. [all data]
Li, Bowen, et al., 2007
Li, X.; Bowen, K.H.; Haranczyk, M.; Bachorz, R.A.; Mazurkiewicz, K.; Rak, J.; Gutowski, M.,
Photoelectron spectroscopy of adiabatically bound valence anions of rare tautomers of the nucleic acid bases,
J. Chem. Phys., 2007, 127, 17, 174309, https://doi.org/10.1063/1.2795719
. [all data]
Desfrancois, Abdoul-Carime, et al., 1999
Desfrancois, C.; Abdoul-Carime, H.; Carles, S.; Periquet, V.; Schermann, J.P.; Smith, D.M.A.; Adamowicz, L.,
Experimental and theoretical ab initio study of the influence of N-methylation on the dipole-bound electron affinities of thymine and uracil,
J. Chem. Phys., 1999, 110, 24, 11876-11883, https://doi.org/10.1063/1.479175
. [all data]
Schiedt, Weinkauf, et al., 1998
Schiedt, J.; Weinkauf, R.; Neumark, D.M.; Schlag, E.W.,
Anion spectroscopy of uracil, thymine and the amino-oxo and amino-hydroxy tautomers of cytosine and their water clusters,
Chem. Phys., 1998, 239, 1-3, 511-524, https://doi.org/10.1016/S0301-0104(98)00361-9
. [all data]
Desfrancois, Abdoul-Carime, et al., 1996
Desfrancois, C.; Abdoul-Carime, H.; Schermann, J.P.,
Electron Attachment to Isolated Nucleic Acid Bases,
J. Chem. Phys., 1996, 104, 19, 7792, https://doi.org/10.1063/1.471484
. [all data]
Verkin, Sukodub, et al., 1976
Verkin, B.I.; Sukodub, L.F.; Yanson, I.K.,
Ionization potentials of nitrogenous bases of of nucleic acids,
Dokl. Akad. Nauk SSSR, 1976, 228, 1452. [all data]
Lifschitz, Bergmann, et al., 1967
Lifschitz, C.; Bergmann, E.D.; Pullman, B.,
The ionization potentials of biological purines and pyrimidines,
Tetrahedron Lett., 1967, 4583. [all data]
Dougherty, Wittel, et al., 1976
Dougherty, D.; Wittel, K.; Meeks, J.; McGlynn, S.P.,
Photoelectron spectroscopy of carbonyls. Ureas, uracils, and thymine,
J. Am. Chem. Soc., 1976, 98, 3815. [all data]
Lauer, Schafer, et al., 1975
Lauer, G.; Schafer, W.; Schweig, A.,
Functional subunits in the nucleic acid bases uracil and thymine,
Tetrahedron Lett., 1975, 45, 3939. [all data]
Hush and Cheung, 1975
Hush, N.S.; Cheung, A.S.,
Ionization potentials and donor properties of nucleic acid bases and related compounds,
Chem. Phys. Lett., 1975, 34, 11. [all data]
Notes
Go To: Top, Phase change data, Gas phase ion energetics data, References
- Symbols used in this document:
EA Electron affinity Tfus Fusion (melting) point ΔfusH Enthalpy of fusion ΔsubH Enthalpy of sublimation ΔsubH° Enthalpy of sublimation at standard conditions ΔvapH° Enthalpy of vaporization at standard conditions - Data from NIST Standard Reference Database 69: NIST Chemistry WebBook
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